BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F06LP1|AL425732
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig960 900 0.0
>3x_Contig960
Length = 2402
Score = 900 bits (452), Expect = 0.0
Identities = 484/492 (98%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 291 ctaatatggaatgaggatraaattagcataacggactggaaaagcggaacaactaccagc 350
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ctaatatggaatgagaaggaa-ttagcataacggactggaaaagcggaacaactaccagc 68
Query: 351 ataaacataccagaaggatttgaaaa-gctgcatgatattatagagataaatggggaaca 409
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 69 ataaacataccagaaggatttgaaaaagctgcatgatattatagagataaatggggaaca 128
Query: 410 tgtgccgcgatttgatcaaagcatagcaagtatagatcttgaaaagctcgaagttttagg 469
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgtgctgcgatttgatcaaagcatagcaagtatagatcttgaaaagctcgaagttttagg 188
Query: 470 cagcgacttcagaaatagtttgaattgtgaaggagtattaaacgaagtktgngctaaaaa 529
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 189 cagcgacttcagaaatagtttgaattgtgaaggagtattaaacgaagtgtg-gctaaaaa 247
Query: 530 attgcagttcaaaaacggcatcactgacatccgttagaagtttagtcgagggaaggctcg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 attgcagttcaaaaacggcatcactgacatccgttagaagtttagtcgagggaaggctcg 307
Query: 590 aaatcctgtctactgatgggaatcgtacgtttgtagatgctggaacacaaatgtgtttag 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaatcctgtctactgatgggaatcgtacgtttgtagatgctggaacacaaatgtgtttag 367
Query: 650 agccattcgtgtacccatgggtaatagcctacagcacttcagaaataaaaattgtaaacg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agccattcgtgtacccatgggtaatagcctacagcacttcagaaataaaaattgtaaacg 427
Query: 710 ttcaagatggacatgtatgcgcagtattcgaatcagattcactcatactcaatgtgtact 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttcaagatggacatgtatgcgcagtattcgaatcagattcactcatactcaatgtgtact 487
Query: 770 gtggtgacagaa 781
||||||||||||
Sbjct: 488 gtggtgacagaa 499
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5069
Number of Sequences: 1807
Number of extensions: 5069
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)